Showing posts with label SciColl. Show all posts
Showing posts with label SciColl. Show all posts

Tuesday, October 17, 2017

Scientific Collections vs. Pandemics: an unfair match?

Fig. 1. Ebola Signs and Symptoms.

Editor’s Note: SciColl held our first community workshop on Emerging Infectious Diseases in October 2014. This October we're posting several pieces that highlight the important work where collections continue to play an integral role.

Editor’s Note: SciColl intern, Ebubechi Okpalugo from Pembroke College, contributed this article as part of her time in the SciColl office during Summer 2017.

Sweeping across three countries and claiming over 11,000 lives, the 2014 West African Ebola outbreak is almost impossible to forget. First identified in 1976, in a remote village named Zaire in what is now the Democratic Republic of Congo, there have been multiple outbreaks of the virus since. But the 2014 pandemic, caused by the Zaire strain, has been the most deadly. Striking on the border of three of the poorest African nations, Sierra Leone, Guinea and Liberia, the virus spread to an unprecedented scale. Liberia, the worst hit, was not officially declared Ebola-free until the 13th of January 2016.

Could it have been stopped quicker? That’s where scientific collections come in.

Tuesday, August 2, 2016

Food security workshop registration now open


We are pleased to invite you to register for our symposium, Stressors and Drivers of Food Security: Evidence from Scientific Collections. The symposium will be hosted by the US Department of Agriculture at the National Agriculture Library in Beltsville, Maryland, just outside Washington, D.C., Monday to Wednesday, 19-21 September 2016.

Thursday, July 7, 2016

The Greatest Hits

Fig.1. Museum in Pennsylvania (Credit: Michelle J. Enemark, 2011) and the Svalbard Global Seed Vault 
 (Credit: Mari Tefre, Global Crop Diversity Trust, via Flickr

Editor’s Note: After two years of exciting and engaging work, staff writer Adele Crane will be leaving Scientific Collections International for graduate school in Arizona. Out of 214 posts garnering more than 34,500 views, Adele chose some of her favorite articles.


From a small natural history museum in Pennsylvania to a seed-bank built to survive doomsday scenarios, collections reside all around the world in many forms. My work over the past two years with Scientific Collections International (SciColl) has been to chip away at only a fraction of the specimens and samples out there, exploring a slew of topics from microbes in your backyard to moon rocks - and on rare cases, even both!

When we initially started the blog, we wanted to connect collections to disease research and response. Articles on cross-disciplinary and novel approaches to outbreaks would lead up to SciColl’s very first workshop on Emerging Infectious Diseases. The workshop was indeed timely, coinciding with the Ebola epidemic in Africa, and it highlighted the need to make this type of active outreach ongoing, instead of sporadic.

Perhaps as a preface to the type of work I will pursue in graduate school, my favorite articles were a fantastic education on how to bridge unique specimens with historic and current disease research. To break down the broad topic of “emerging infectious diseases,” we focused on smaller case studies of known and relatively unknown pathogens that affect millions around the world:

  • Disease Collections and How They Can Save the World: In 1976, a broken vial of blood transported in luggage from the Democratic Republic of the Congo found its way to the young Belgian scientist, Peter Piot. The blood carried one of the most feared pathogens in current disease research. 

  • C. Miguel Pinto, the Disease Detective: A conversation with C. Miguel Pinto in our very own museum explored the cross-section of disease research and classic taxonomy, in which basic evolutionary principles are tested. 

Fig.2. Plate of microorganisms that were cultured from the soil
(Credit: Julia Stevens)

Over the course of the blog, we looked beyond case studies and current research challenges. How can ancient specimens inform future problems? There are many examples where collections were used to further important research in areas like environmental change and food security.

When we take a step back, the larger impacts of educating the next generation of scientists or bringing countries together to protect biodiversity are extraordinarily important. After working with SciColl, I am grateful to have gained that perspective and I hope to hear many more of these stories in years to come:

  • Microbes and Middle Schools: Citizen science has the ability to reach both students and researchers in powerful ways. Collections that not only support invasive species studies but engage middle schoolers in science are a cornerstone of ongoing work at the North Carolina Museum of Natural Sciences. 

  • Seeds for the End of the World: Seed banks preserve both biological diversity and cultural heritage. Banks around the world, from Peru to Norway, are working to provide a future for agriculture and historical practices. 

  • Smart Collecting: A New Collecting Culture: What began as a short discussion in our Emerging Infectious Disease workshop turned into a larger conversation about a “collecting culture” that could be improved for museums and biobanks alike.

Tuesday, July 5, 2016

Save the Date: Food Security Symposium


We are excited to announce the symposium “Stressors and Drivers of Food Security: Evidence from Scientific Collections,” which will bring together researchers and experts on scientific collections across disciplines to address issues regarding food security. This symposium will be held September 19 to 21 at the National Agriculture Library in Beltsville, Md., and will be hosted by the U.S. Department of Agriculture and Scientific Collections International.

Friday, July 1, 2016

SciColl presentations at SPNHC and GGBN

We were pleased to attend the SPNHC and GGBN meetings last week in Berlin. We look forward to continuing the conversations with our many colleagues and other collections champions!

If you weren’t able to attend SPNHC, those sessions were recorded. Find them all on iDigBio’s site. David presented in the Collections for the Future session on Thursday afternoon and Eileen presented in the second DemoCamp session on Friday morning.

Our GGBN talks weren’t recorded, but we’ve uploaded the slides for David’s Thematic, Demand-driven Sampling: Economics of Three Strategies, his presentation for GGBN, and Scientific Collections, Food Security and Emerging Infectious Diseases, which he presented at SPNHC.  Eileen’s A Global Registry of Scientific Collections: Striking a Balance Between Disciplinary Detail and Interdisciplinary Discoverability presentation are also uploaded. They can also be found in GGBN’s document library. (If you would like an account, send a request to: library@ggbn.org).

Tuesday, December 29, 2015

A Year in the Life of Scientific Collections

Fig.1. Scenes from the Svalbard Global Seed Vault (Credit left to right: Neil Palmer/CIAT, 2011Mari Tefre/Global Crop Diversity Trust, 2008Dag Terje Filip Endresen/Svalbard Global Seed Vault, 2008)

Earlier this year, the International Center for Agricultural Research in the Dry Areas (ICARDA) made a request to withdraw seeds from the Svalbard Global Seed Vault, which holds more than 850,000 samples from every country in the world. This request is the first of its kind for the “Doomsday Vault” that holds duplicate seed samples for national and international gene banks. The Syrian civil war forced ICARDA to move its headquarters from Aleppo, Syria, to Beirut, Lebanon, in 2012, and researchers managed to save 80 percent of the seed samples by sending them into storage at Svalbard.

Although such a withdrawal will allow ICARDA to regenerate these precious samples, it reveals the vulnerability of collections to war or even natural disasters. The year of 2015 marked a specific effort by individuals and organizations around the world to protect and sustain scientific collections, from those housed in natural history museums to frozen specimens in gene banks. We identified major trends that have affected both how collections are viewed in science and policy, as well as how they can be protected for generations to come. Read to learn more about what happened in the collections world this year, and what you should watch out for in 2016.

Tuesday, March 24, 2015

Report explores use of scientific collections in combating emerging infectious diseases



Editor's Note

The October 2014 workshop report can be seen here. For more information about SciColl, visit www.scicoll.org.


WASHINGTON -- Scientific Collections International, or SciColl, a global consortium devoted to promoting the use and impact of object-based scientific collections across disciplines, hosted a two-day workshop in October 2014, bringing together some of the world’s leading minds in emerging infectious diseases.